Welcome to the OncoMiner Pipeline
Add a gene list
This page allows you to upload a gene-list file containing GenBank gene names.
Once such a list is uploaded, it can be used as an "include" or "exclude" list
to restrict the pipeline's analysis to specific sets of genes.
- Gene-list files should be plain-text files containing GenBank gene names, one per line.
- When you have composed a file containing the desired gene names, click "Choose file"
below and select your gene-list file for upload.
- Enter a description of the gene list in the "Describe this file" field. For example,
if your file contains genes known to be involved in pancreatic cancer, a suitable
description might be "Pancreatic cancer-related genes".
- Click "Submit" to upload your file.
- When submitting future nucleotide variant jobs to the pipeline via the
Submit a nucleotide variant job link, your gene list will be avaible in the
"include" and "exclude" lists.
- Uploaded gene lists are removed after 72 hours, so use them promptly. [Gene-list
removal is not yet implemented.]